Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015937365.1_cds_XP_016482663.1_73865
CDS Infomation

[gene=LOC107803457] [db_xref=GeneID:107803457] [protein=type I inositol polyphosphate 5-phosphatase 8-like] [protein_id=XP_016482663.1] [location=join(118..193,1178..1265,2335..2439,3100..3598,3689..3882,4049..4157,4294..4442,5753..5912)] [gbkey=CDS]
Sequence

ATGGGTAGAGGAGAAAGAAGAAGAAAAAGTTGCTCAGACGATGGTTCTTGCGTTGTGGTG
CCGGAGGAATTATCAGAAAGTTGGTTGATGGAAACAAATGATGGAATTCAACGGCCAATA
TTGGAGAAAGAGGCATTCACTGTCACTGATCATCAAAACCTTAGGATGTTCGTGGGAACA
TGGAATGTTGGAGGCAAGTCACCACACGATGGGTTGAACTTAGAGGACTGGTTGAATTCC
ACTGCACCAGCTGACATCTATGTGCTTGGGTTCCAGGAAATTGTCCCTCTAAATGCAGGC
AATGTACTAGGTCCAGAGGACAGTGGTCCAGCTGCCAAGTGGCTTTCCTTGATTCGTCAA
GCTTTGAACAACAACACAAACACCCCAGATCTTTCTCCTAATTACAATAACACCCCAAAT
TCCGAGCGAAAAAGTTCATCCCCGTCCTTCCATGACTTGCACCAACAACAATCTAACCTT
AAACCAAGAATCAGCTTCTCAGATTTGATCAAATTGGAAAATGAACTCGAGCGAGAAGAT
TGGGAGAGACTCTTGAGTATGAATGACGATGGATCGTCCAGTCCAAATTGCATGTCAAAT
AGATATAACTCTTCTAGCCTTGAGCAAAATAGCTATTGCTTAGCAGCAAGCAAACAAATG
GTTGGTTTGTTTCTATGCATATGGACTCGTACCGATTTGTATCGACACATTAGCAACTTG
AAGGTTTCTTGTGTTGGAAGAGGCATCATGGGCTATCTTGGAAATAAGGGTTCGATATCG
ATCAGTATGACGTTGCATCACAAGACATTTTGTTTCGTTTGTACTCATTTGGCATCTGGA
GAGAAAGAAGGTGATGAGATCAAAAGAAATTCAGATGTCATGGAAATTTTAAAGAAAACA
AGGTTTTCACATAGTAGGATTATTGGAAAACCTCTTCCTCCTGATAACATTTTGGATCAC
GACAAGATAATTTGGCTTGGAGATTTGAATTACCGGCTTGCATCCGGTTTTCAGGATACA
TACGAGTTGGTAAACAACAGTAACTGGGAAGCACTTCTAAAAAAAGATCAGCTAAGGATA
GAGCAAAAAGCAGGACGTGTATTCAAAGGTTGGAAAGAAGGAAATATTTACTTTGCTCCA
ACATACAAATACCTCTACAATTCTGACCATTATGTTGTTCAAACTTGCACATCAAAGGAA
AAGCGAAGGACTCCTGCCTGGTGTGACAGGATTTTATGGAAAGGTGAAGGACTAAAGCAA
ATATGTTATGTTAGAGGAGAATCAAAGTTCTCAGATCACAGACCAGTCTACTCACTTTTC
TCAGTAAATAATTTAACAGAAAGGTACCAAAGTGAAAAAGAATATTTCACTACCCTTTAG

Peptide Sequence

PEP ID

XP_016482663.1
PEP Infomation

PREDICTED: type I inositol polyphosphate 5-phosphatase 8-like [Nicotiana tabacum]
Sequence

MGRGERRRKSCSDDGSCVVVPEELSESWLMETNDGIQRPILEKEAFTVTDHQNLRMFVGT
WNVGGKSPHDGLNLEDWLNSTAPADIYVLGFQEIVPLNAGNVLGPEDSGPAAKWLSLIRQ
ALNNNTNTPDLSPNYNNTPNSERKSSSPSFHDLHQQQSNLKPRISFSDLIKLENELERED
WERLLSMNDDGSSSPNCMSNRYNSSSLEQNSYCLAASKQMVGLFLCIWTRTDLYRHISNL
KVSCVGRGIMGYLGNKGSISISMTLHHKTFCFVCTHLASGEKEGDEIKRNSDVMEILKKT
RFSHSRIIGKPLPPDNILDHDKIIWLGDLNYRLASGFQDTYELVNNSNWEALLKKDQLRI
EQKAGRVFKGWKEGNIYFAPTYKYLYNSDHYVVQTCTSKEKRRTPAWCDRILWKGEGLKQ
ICYVRGESKFSDHRPVYSLFSVNNLTERYQSEKEYFTTL

Transcript Sequence

Gene sequence data has not been registered.